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Choosing the Best e-invoicing Software Malaysia for SMEs |LHDN e-invoice Guideline [2024/2025]

Learn about self-billed e-invoices, including when to issue them and how to follow IRBM guidelines. Explore detailed examples and best practices.

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As Malaysia moves towards mandatory e-invoicing for businesses starting in 2024, Small and Medium Enterprises (SMEs) need to adopt compliant and efficient e-invoicing software Malaysia. The Inland Revenue Board of Malaysia (LHDN) has issued guidelines and technical requirements that businesses must follow. 

Latest Update for SMEs on e-invoicing Malaysia 

The latest updates on e-invoicing Malaysia for SMEs, as of October 2024, focus on phased implementation and compliance requirements set by the Inland Revenue Board of Malaysia (LHDN). SMEs need to be aware of the following key points:

  1. Phased Implementation Timeline: The implementation of e-invoicing began on August 1, 2024, for companies with an annual turnover of RM100 million or more. For SMEs with lower turnovers, the deadline extends into 2025 and beyond, with all businesses expected to comply by January 1, 2027. This phased approach allows businesses to gradually transition and comply with LHDN’s e-invoicing requirements.
  2. Six-Month Grace Period: For businesses that fall under the August 2024 deadline, LHDN has provided a six-month grace period, during which penalties will not be enforced for non-compliance. This allows SMEs additional time to implement and adjust to the new systems without the pressure of immediate penalties​(The Star
    )​(Hasil).
  3. Technology and Integration: Many businesses, particularly SMEs, are encouraged to adopt cloud-based solutions that easily integrate with their existing financial systems. Platforms like Xero are becoming popular among Malaysian SMEs for automating and managing invoices. These systems not only ensure compliance but also reduce manual processing, thus improving efficiency​(The Star).
  4. Peppol Network: Malaysia has also adopted the Peppol e-invoicing network, which standardizes how businesses exchange invoices both domestically and internationally. This system enhances data security and reduces the risk of fraud, while also supporting businesses that engage in cross-border transactions, particularly with countries like Singapore and Australia​(Hasil).

By preparing early and choosing software that integrates seamlessly with LHDN’s MyInvois portal system, SMEs can ensure a smoother transition to the e-invoicing landscape, benefiting from enhanced operational efficiency and reduced administrative burdens.

5 Factors to Consider When Choosing e-invoicing Platform for SMEs

Choosing the right e-invoicing software Malaysia not only ensures compliance but also enhances operational efficiency. Here’s a guide to help SMEs in Malaysia make the best choice for their e-invoicing platform needs.

1. Compliance with LHDN Regulations

The first and most crucial factor is ensuring that the e-invoicing software Malaysia adheres to LHDN’s regulations. The software should support the data formats required by LHDN, such as XML or JSON. It must also comply with the latest LHDN e-Invoice Guideline (Version 4.0) and specific technical requirements outlined in Version 3.1. Ensuring that your chosen software supports these formats and requirements will streamline your submission process to LHDN’s MyInvois portal.

2. Integration Capabilities

For SMEs, integrating e-invoicing software with existing systems is vital for reducing manual data entry and avoiding errors. Make sure the software seamlessly integrates with your current accounting systems or Enterprise Resource Planning (ERP) platforms, such as SAP or Oracle. Some e-invoicing software solutions also offer API integration with the MyInvois portal, which allows real-time invoice generation, validation, and submission.

3. Scalability and Cost-Effectiveness

SMEs should focus on finding scalable and cost-effective solutions that match their business needs. Look for software that can grow with your business and does not require complex, costly implementations. Cloud-based solutions are often the best choice for SMEs because they offer scalability, affordability, and remote access capabilities. As your business grows, the e-invoicing software Malaysia should be able to handle an increasing number of invoices without requiring major upgrades.

4. User-Friendly e-invoicing Software Interface

A simple, intuitive user interface is essential, especially for SMEs that may not have extensive IT resources. A user-friendly interface allows for a smoother transition to e-invoicing, minimizing the time and effort spent on training employees. Look for software that provides easy navigation, accessible features, and comprehensive user support or tutorials.

5. Data Security and Support

Security should be a top priority when dealing with sensitive financial data. Make sure the software uses encryption protocols and complies with industry standards for data security. Also, check if the vendor offers reliable customer support to help you navigate any technical issues. Quick and effective support is especially crucial during the initial setup and integration process.

Top 3 e-Invoicing Software Options for SMEs in Malaysia

Here are some LHDN-compliant e-invoicing software options that SMEs in Malaysia should consider:

1. JomeInvoice

JomeInvoice is a Malaysia-based e-invoicing software provider trusted by many businesses. The software is widely recognized for its easy integration with ERP platforms like SAP and Oracle, as well as its flexible pricing options for SMEs. It has been widely adopted by companies in Malaysia’s Phase 1 of e-invoicing Malaysia implementation.

2. Cleartax

ClearTax is an LHDN-compliant e-invoicing software solution that simplifies the invoicing process for Malaysian SMEs. It offers easy integration with popular ERP systems and ensures 100% compliance with the LHDN’s guidelines. The platform also provides real-time validation and submission of invoices to the MyInvois portal, streamlining the entire process.

3. Complyance

Complyance is another excellent option for SMEs looking to ensure compliance with Malaysia’s e-invoicing regulations. This software is designed to meet LHDN’s requirements, offering flexible integration with your business’s existing systems. It also ensures that your e-invoicing process is efficient and error-free.

Wrapping Up e-invoice Platform Choosing Guideline

Selecting the best e-invoicing software Malaysia for your SME is essential to ensure compliance with the LHDN e-invoice Guideline 2024/2025 and to improve your business’s operational efficiency. The key factors to consider are compliance, integration capabilities, scalability, ease of use, and data security. By choosing a solution that meets these criteria, you can make your transition to e-invoicing paltform smooth and hassle-free.


JomeInvoice: Best e-invoicing Software Malaysia Trusted by Over 60+ major companies in Phase 1 

JomeInvoice: Best e-invoicing Software Malaysia

As Malaysia transitions into mandatory e-invoicing, businesses are on the lookout for the best e-invoicing software solutions to stay compliant with LHDN’s regulations. In addition to mastering the MyInvois Portal, it’s crucial to have an e-invoicing software Malaysia that can simplify this process. This is where JomeInvoice stands out as one of the Top 3 middleware e-invoicing platforms in Malaysia

Why JomeInvoice is the Best e-invoicing Software Solution for SMEs and Large Enterprise Malaysia:

JomeInvoice stands out as the most user-friendly and comprehensive e-invoicing software solution, offering the perfect balance of flexibility, compliance, and support for both SMEs and large enterprise Malaysia. Whether you are transitioning into the LHDN e-invoice mandate or looking to streamline your current invoicing process, JomeInvoice provides everything you need—from free trials to ongoing updates and local support.

  1. Flexible System Compatibility
    JomeInvoice offers seamless integration with popular systems such as SAP ECC6, S4 Hana, Sage300, MS365, Netsuite, Odoo, Xero & etc. This flexibility makes it ideal for businesses of all sizes—whether you’re an SME or a large enterprise Malaysia, JomeInvoice adapts to your current operations without a hitch.
  2. Full Compliance with LHDN e-invoice Platform Regulations
    Compliance is key, and JomeInvoice ensures that your business meets all LHDN e-invoice guidelines. ISO-certified and fully PDPA-compliant, JomeInvoice offers a secure, worry-free invoicing process that keeps you aligned with Malaysia’s regulatory standards.
  3. 3-Month Free Subscription
    JomeInvoice gives new users the opportunity to explore its full range of features at no cost for the first three months. This trial period is especially beneficial for SMEs looking to evaluate the platform before committing, with dedicated support from their expert Malaysian team included.
  4. Trusted by Leading Businesses
    Over 60+ major companies, including those in Phase 1 of e-invoicing compliance, rely on JomeInvoice for their invoicing needs. The platform is proven to handle large-scale, complex transactions seamlessly, making it a trusted choice across industries.
  5. Free Upgrades, Training, and Dedicated Support
    JomeInvoice keeps your business up to date with automatic upgrades that maintain LHDN compliance. Plus, free training and access to a dedicated Malaysian support team ensure your staff can easily adapt to the platform. With cloud server capabilities, you’ll also benefit from secure, flexible invoicing solutions.
  6. Backed by a Listed Company
    JomeInvoice is not just reliable but also backed by a publicly listed company on Bursa Malaysia. This adds an extra layer of trust and assurance for businesses looking to invest in long-term solutions.

Ready to streamline your e-invoicing processes?

Contact JomeInvoice today and take advantage of the 3-month free subscription! Our dedicated team is ready to help your business stay ahead with compliance and efficiency.


Contact JomeInvoice Sdn Bhd:

  • Address:
    Level 38, MYEG Tower, Empire City Damansara, Jalan PJU 8, Damansara Perdana, 47820 Petaling Jaya, Selangor
    D-04-07, Plaza Bukit Jalil (Aurora Place), No. 1, Persiaran Jalil 1, Bandar Bukit Jalil, 57000 Kuala Lumpur
  • Phone: +6016-732 0163
  • Social Media:
    LinkedIn | Facebook

Don’t wait—schedule a free consultation today and see why JomeInvoice is the top choice for businesses nationwide!

Read More on Malaysia e-invoicing Latest Updates

  1. How to Issue e-invoice using Myinvoid Portal 
  2. 2024/2025 e-invoice Malaysia Integration Models Explained
  3. Sept 2024: e-invoicing Malaysia Guidelines Explained for Buyer & Seller | Self-Billed e-invoice
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